Health & Medicinepreprint2026-11-03

Defining ocular Chlamydia trachomatis infection prevalence thresholds for the trachoma elimination endgame

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Abstract

Trachoma is the leading infectious cause of blindness worldwide and is targeted for global elimination as a public health problem by 2030. As we approach this target, defining when population-level trachoma control interventions can be stopped, and determining how post-intervention surveillance should be performed, are becoming increasingly important. Molecular diagnosis of ocular Chlamydia trachomatis (Ct) using polymerase chain reaction (PCR) provides a highly sensitive and specific indicator of infection, yet there are currently no programmatic guidelines based on Ct infection. We assembled 86 cross-sectional surveys of ocular Ct infection from 13 countries, representing data from 46,914 children aged 1-5 years. Our analyses suggest that infection prevalence of 0.81% in this age group corresponds to a threshold below which population-level interventions can be stopped with at least 90% confidence. Correspondingly, with confidence exceeding 90%, we propose that interventions should continue when infection prevalence is greater than 1.99%. Interpretation of infection surveillance data is a generalisable challenge in low-prevalence settings for many infectious diseases. This study proposes a robust framework for how Ct infection surveillance could support accurate population-level assessments of trachoma endemicity and could allow a step-change in decision-making precision for programmes as we approach the endgame for trachoma elimination.

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View paper (DOI)OpenAlexmedRxivPublished 2026-11-03

Authors: Anna Borlase, Jacob A. Cohen, Everlyn Kamau, Rosemary Pearson-Clarke, Kristen K. Renneker, Fentahun Tadesse Akale, Paul Akampurira, Abdou Amza, Sue-Chen Apadinuwe, Solomon Aragie, Sylvie Biyaki Araka, Zebene Ayele, Getahun Ayenew, Mohamed S. Bah, Robin L. Bailey, Ana Bakhtiari, Stephen Begumisa, Tesfahun Bishaw Mengiste, Yak Yak Bol, Lochebe Boniface, Sarah Elizabeth Boyd, Elizabeth Kelly Callahan, David Chaima, Benard Chieng, Ambahun Chernet, Adisu Abebe Dawed, Michael Dejene, Dereje Duguma, Belgesa E Elshafie, Samuel Eshitemi Omukuba, Mawo Fall, Mohammed Feyisso Shaka, Katherine Gass, Teshome Gebre, Tania A. Gonzalez, Henry Emisiko, Emma Michele Harding-Esch, Pamela J. Hooper, Kimberly A. Jensen, Cristina Jimenez, Boubacar Kadri, John Martin Kaldor, Khumbo Kalua, Henry Muriuki Kanyi, Mabula Joseph Kasubi, Fikreab Kebede, Jeremy David Keenan, Amir Bedri Kello, Richelle W. Kihoro, Namasiku Siyumbwa Kunda, Stephen Bernard Lambert, Sara Lavinia Brair, Kathleen D. Lynch, Benjamin Marfo, Michael Peter Masika, Stephen Gabriel Mbwambo, Harran A. Mkocha, Tamimo Momade, Caleb Damilep Mpyet, Kangwa I. M. Muma, Constity Mwale, Clarer Jones, Beido Nassirou, Susana Vaz Nery, Jeremiah Ngondi, Sammy M. Njenga, Stephen Ohidor, Catherine E. Oldenburg, Nicholas P. Olobio, Rapheal Opon, William Edward Oswald, Fatai Oyediran, Martha Saboyá, Angelia M. Sanders, Eshetu Sata, Fikre Seife, Laura G. Senyonjo, Esther A. Shiraho, Henis Mior Sitoe, Hiwot Solomon, Jesse Speer, Zerihun Tadesse Gebreselassie, Sandra Liliana Talero, Emma Michelle Taylor, Teyil Wamyil-Mshelia, Titus Watitu Kimani, Sheila K. West, Dionna M. Wittberg, Dorothy Yeboah‐Manu, Mulat Zerihun, Tàye Zeru, Thomas M. Lietman, Scott D. Nash, Benjamin F. Arnold, Anthony W. Solomon

Institutions: The University of Queensland, Johns Hopkins University, London School of Hygiene & Tropical Medicine, University of Oxford, University of California, San Francisco, UNSW Sydney, Government of Ethiopia, Amhara Regional Health Bureau, Johns Hopkins Medicine, Ministry of Health, Ministry of Health, RTI International, Ghana Health Service, World Health Organization Regional Office for Africa, Kampala International University, Family Health International 360, Noguchi Memorial Institute for Medical Research, San Francisco Foundation, University of Jos, Kenya Medical Research Institute, World Health Organization, Translational Research Institute, Ministry of Health, Kamuzu Central Hospital, World Health Organization Regional Office for the Americas, Ministry of Health, Blantyre Institute for Community Ophthalmology, Muhimbili National Hospital, Instituto Nacional de Saúde, Federal Ministry of Health, Instituto de Medicina Tropical, University of Lusaka, The Task Force for Global Health, Carter Center, Vector & Vector-Borne Diseases Research Institute, Kirby Institute, Sightsavers, Federal Ministry of Health, Federal Ministry of Health, International Trachoma Initiative, The Carter Center, Ministry of Health, AfricArXiv, International Trachoma Initiative