Custom scripts used in Vicia faba VF8137 genome
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Abstract
Box.R-A R script inorder to plot some box pictures. change_table.pl-Change some special format of files. hap_fig.R-Drawing haplotypes. makeagpfromscaffold.change.pl-Split genome to contig sequence. manhantan.R-Ploting some manhattan pictures. merge_vcf.py-Mergeing vcf file(spliting because of chromosome length). pheatmap.R-pheatmap plotting script. pick_target.id.pl-Picking some target genes. split_big_Chr_for_GWAs.py-Split vcf for Gwas analysis. Violin.R-Ploting violin pictures.
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View paper (DOI)Open access versionOpenAlexZenodo (CERN European Organization for Nuclear Research)Published 2026-10-07
Authors: Rong Liu