Institute of Genetics and Cancer

The moonlighting functions of SEC13 in nonsense-mediated mRNA decay and the regulation of ER stress

ABSTRACT The nonsense-mediated decay pathway (NMD) is an RNA quality control mechanism that regulates the stability of target RNAs. We previously identified the ER-localized SEC13 protein as a novel NMD factor in C. elegans and in HeLa cells; raising the possibility that it could...

Response of the replisome to araA and araC suggests a mechanism for arabinosyl nucleoside tolerance

Arabinosyl (ara) nucleoside analogues such as vidarabine (araA) and cytarabine (araC) are antimetabolites known to inhibit DNA polymerases in isolation. However, their effects on DNA synthesis catalysed by the multi-protein replisome remain unknown. Here, we uncover a central rol...

Why variant effect predictors and multiplexed assays agree and disagree

Abstract Computational variant effect predictors (VEPs) and multiplexed assays of variant effect (MAVEs) are two key tools for assessing the functional consequences of genetic variants. While their outputs are often concordant, there are also many differences. Here, we analyse mi...