Teemu Smura

LazypipeX: customizable virome analysis pipeline enabling fast and sensitive virus discovery from NGS data

Abstract Metagenomic next-generation sequencing (mNGS) is pivotal for detecting known and novel viruses, however, its efficacy depends on applied bioinformatics pipelines. We present Lazypipe Extended (LazypipeX), an mNGS pipeline employing modular “annotation strategies” to opti...