Alice Cleynen

Estimating relapse time distribution from longitudinal biomarker trajectories using iterative regression and continuous time Markov processes

Abstract Biomarker measurements obtained by blood sampling are often used as a non-invasive means of monitoring tumour progression in cancer patients. Diseases evolve dynamically over time, and studying longitudinal observations of specific biomarkers can help to understand patie...

A refined Saccharomyces cerevisiae reference transcriptome from Direct RNA Sequencing, with a reusable pipeline for UTR annotation updates

Untranslated regions (UTRs) flanking the coding sequence govern mRNA translation, localisation, and decay, making accurate UTR boundaries essential for quantitative RNA sequencing and the study of post-transcriptional control. Reference transcriptomes built from short-read sequen...