Abhinav Sharma

ABC-cluster: African Bioinformatics Computing Cluster, a domain-specific platform for research computing in low-resource settings.

Africa CDC recorded 153 public health events on the African continent in 2022, 166 in 2023 and 212 in 2024. The computational infrastructure needed for genomic surveillance must be able to sustainably accommodate this frequency. However, the analytical capacity in Africa continue...

Workflow management systems and reproducible pipelines for Plasmodium falciparum genomic surveillance: tools, design principles and infrastructure challenges

Genomic data are increasingly leveraged to enable malaria genomic surveillance, with many teams now generating Plasmodium falciparum sequence data for routine analysis. However, downstream analysis remains dependent on ad-hoc scripts and local infrastructure. This reliance limits...